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1

The LysR-type regulator AtzR binding site: DNA sequences involved in activation, repression and cyanuric acid-dependent repositioning

Odil Porrúa, Manuel García-Jaramillo, Eduardo Santero, Fernando Govantes

Journal:

Molecular Microbiology

Year:

2007

Language:

english

File:

PDF, 655 KB

english, 2007

2

Activation and repression of a σN-dependent promoter naturally lacking upstream activation sequences

Odil Porrúa, Vicente García-González, Eduardo Santero, Victoria Shingler, Fernando Govantes

Journal:

Molecular Microbiology

Year:

2009

Language:

english

File:

PDF, 434 KB

english, 2009

3

Complex interplay between the LysR-type regulator AtzR and its binding site mediates atzDEF activation in response to two distinct signals

Odil Porrúa, Ana Isabel Platero, Eduardo Santero, Gloria Del Solar, Fernando Govantes

Journal:

Molecular Microbiology

Year:

2010

Language:

english

File:

PDF, 834 KB

english, 2010

4

Regulation of the atrazine-degradative genes in Pseudomonas sp. strain ADP

Fernando Govantes, Vicente García-González, Odil Porrúa, Ana Isabel Platero, Alicia Jiménez-Fernández, Eduardo Santero

Journal:

FEMS Microbiology Letters

Year:

2010

Language:

english

File:

PDF, 193 KB

english, 2010

5

Atrazine biodegradation in the lab and in the field: enzymatic activities and gene regulation

Fernando Govantes, Odil Porrúa, Vicente García-González, Eduardo Santero

Journal:

Microbial Biotechnology

Year:

2009

Language:

english

File:

PDF, 216 KB

english, 2009

6

In vivo SELEX reveals novel sequence and structural determinants of Nrd1-Nab3-Sen1-dependent transcription termination

Porrua, Odil, Hobor, Fruzsina, Boulay, Jocelyne, Kubicek, Karel, D‧Aubenton-Carafa, Yves, Gudipati, Rajani Kanth, Stefl, Richard, Libri, Domenico

Journal:

The EMBO Journal

Year:

2012

Language:

english

File:

PDF, 1.80 MB

english, 2012

7

RNA quality control in the nucleus: The Angels' share of RNA

Porrua, Odil, Libri, Domenico

Journal:

Biochimica et Biophysica Acta (BBA) - Gene Regulatory Mechanisms

Year:

2013

Language:

english

File:

PDF, 551 KB

english, 2013

8

A bacterial-like mechanism for transcription termination by the Sen1p helicase in budding yeast

Porrua, Odil, Libri, Domenico

Journal:

Nature Structural and Molecular Biology

Year:

2013

Language:

english

File:

PDF, 1.12 MB

english, 2013

9

An A-tract at the AtzR binding site assists DNA binding, inducer-dependent repositioning and transcriptional activation of the P atzDEF promoter

Porrúa, Odil, López-Sánchez, Aroa, Platero, Ana I., Santero, Eduardo, Shingler, Victoria, Govantes, Fernando

Journal:

Molecular Microbiology

Year:

2013

Language:

english

File:

PDF, 966 KB

english, 2013

10

Molecular Basis for Coordinating Transcription Termination with Noncoding RNA Degradation

Tudek, Agnieszka, Porrua, Odil, Kabzinski, Tomasz, Lidschreiber, Michael, Kubicek, Karel, Fortova, Andrea, Lacroute, François, Vanacova, Stepanka, Cramer, Patrick, Stefl, Richard, Libri, Domenico

Journal:

Year:

2014

Language:

english

File:

PDF, 3.73 MB

english, 2014

11

Roadblock Termination by Reb1p Restricts Cryptic and Readthrough Transcription

Colin, Jessie, Candelli, Tito, Porrua, Odil, Boulay, Jocelyne, Zhu, Chenchen, Lacroute, François, Steinmetz, Lars M., Libri, Domenico

Journal:

Year:

2014

Language:

english

File:

PDF, 2.38 MB

english, 2014

12

Transcription termination and the control of the transcriptome: why, where and how to stop

Porrua, Odil, Libri, Domenico

Journal:

Nature Reviews Molecular Cell Biology

Year:

2015

Language:

english

File:

PDF, 824 KB

english, 2015

13

Cryptic Transcription and Early Termination in the Control of Gene Expression

Colin, Jessie, Libri, Domenico, Porrua, Odil

Journal:

Genetics Research International

Year:

2011

Language:

english

File:

PDF, 266 KB

english, 2011

14

Transcription Termination: Variations on Common Themes

Porrua, Odil, Boudvillain, Marc, Libri, Domenico

Journal:

Trends in Genetics

Year:

2016

Language:

english

File:

PDF, 2.11 MB

english, 2016

15

Sen1 has unique structural features grafted on the architecture of the Upf1‐like helicase family

Leonaitė, Bronislava, Han, Zhong, Basquin, Jérôme, Bonneau, Fabien, Libri, Domenico, Porrua, Odil, Conti, Elena

Journal:

The EMBO Journal

Year:

2017

Language:

english

File:

PDF, 3.90 MB

english, 2017

16

Helicases as transcription termination factors: different solutions for a common problem

Han, Zhong, Porrua, Odil

Journal:

Year:

2017

Language:

english

File:

PDF, 694 KB

english, 2017

17

High‐resolution transcription maps reveal the widespread impact of roadblock termination in yeast

Candelli, Tito, Challal, Drice, Briand, Jean‐Baptiste, Boulay, Jocelyne, Porrua, Odil, Colin, Jessie, Libri, Domenico

Journal:

The EMBO Journal

Year:

2018

Language:

english

File:

PDF, 2.93 MB

english, 2018

18

Biochemical characterization of the helicase Sen1 provides new insights into the mechanisms of non-coding transcription termination

Han, Zhong, Libri, Domenico, Porrua, Odil

Journal:

Nucleic Acids Research

Year:

2017

Language:

english

File:

PDF, 1.93 MB

english, 2017

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